I'd like to see the "Transmit:" options from the FTP uploader (Original Photos vs. Saved as JPEG w/ options) be stored as part of the FTP Connection profile.
This would allow the configuration of those options to be specific to each FTP server, useful when different clients have different requirements.
For example, client 1 wants the original photos with WAV files while client 2 wants them resized to be a maximum of 4,000 pixels converted to SRGB.
This would help prevent mistakes for photographers who work for multiple clients when bouncing between assignments.