Kirk,
as you recommended I'm checking the demo of the latest version:
Still the same - after ingest from the D200 some photos are rotated to portrait, but most of them are not.
The improvement: PM rotates all selected on manual command
Made a comparison to my Ixus: here after ingest all photos appear in correct orientation.
Could the problem be a bad orientation exif tag in the D200?
Greets,
HM